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Protein Alignment cad and HB51
DIOPT Version :9
Sequence 1: | NP_001260641.1 |
Gene: | cad / 35341 |
FlyBaseID: | FBgn0000251 |
Length: | 445 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_195999.2 |
Gene: | HB51 / 831723 |
AraportID: | AT5G03790 |
Length: | 235 |
Species: | Arabidopsis thaliana |
Alignment Length: | 128 |
Identity: | 30/128 - (23%) |
Similarity: | 51/128 - (39%) |
Gaps: | 22/128 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 237 NSVSN--NNRTSPSKPPYFDWMKKPAYPA------QPQPDLSSSPNLEDLSDLLDASGKTRTKDK 293
::.|| |.|.:...|| |.:..::.: .|....|.:|.......::......:..:.
plant 4 STTSNVENVRVAFMPPP---WPESSSFNSLHSFNFDPYAGNSYTPGDTQTGPVISVPESEKIMNA 65
Fly 294 YRVV-----------YTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAK 345
||.. .|..|...||:.:.....:...||.:|::.|.|..||:.:|||||||:
plant 66 YRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRAR 128
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
cad | NP_001260641.1 |
Homeobox |
295..347 |
CDD:278475 |
19/62 (31%) |
HB51 | NP_195999.2 |
Homeobox |
77..130 |
CDD:395001 |
18/52 (35%) |
HALZ |
132..167 |
CDD:396657 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
1 |
1.000 |
53 |
1.000 |
Domainoid score |
I4196 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X14 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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