Protein Alignment cad and HB-1

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_186796.1
• Gene: HB-1 / 821138
• AraportID: AT3G01470
• Length: 272
• Species: Arabidopsis thaliana
• Alignment Length: 161
• Identity: 50/161 - (31%)
• Similarity: 71/161 - (44%)
• Gaps: 45/161 - (27%)

  Fly   227 PSTHNNNN-----NNN---------SVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLED 277
            ||..:.|:     |.|         |:.|...|| .:.|:|                 |||  ||
plant    10 PSASHGNSMFFLGNLNPVVQGGGARSMMNMEETS-KRRPFF-----------------SSP--ED 54

  Fly   278 LSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNR 342
            |.|  |.....:..:|.|.:.|:...| |||.:.|...:...||::||:.|.|..|||.:|||||
plant    55 LYD--DDFYDDQLPEKKRRLTTEQVHL-LEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNR 116

  Fly   343 RAK-ERKQNKKGSDPNVMGVGVQHADYSQLL 372
            ||: :.||.::..|       :..:.|.|||
plant   117 RARWKTKQLERDYD-------LLKSTYDQLL 140

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	24/55 (44%)
HB-1	NP_186796.1	Homeodomain	68..121	CDD:459649	24/53 (45%)
		HALZ	123..164	CDD:460477	7/25 (28%)