Protein Alignment cad and HB21

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_179445.1
• Gene: HB21 / 816370
• AraportID: AT2G18550
• Length: 220
• Species: Arabidopsis thaliana
• Alignment Length: 180
• Identity: 46/180 - (25%)
• Similarity: 70/180 - (38%)
• Gaps: 57/180 - (31%)

  Fly   235 NNNSVSNNNRTSPSK--PPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVV 297
            ||.:|.::|....|:  |..:.       |..||....:.|           :.:.:.|.|..||
plant     2 NNQNVDDHNLLLISQLYPNVYT-------PLVPQQGGEAKP-----------TRRRKRKSKSVVV 48

  Fly   298 YTD--------FQRLELEKEYCTSRYITI--------RRKSELAQTLSLSERQVKIWFQNRRAKE 346
            ..:        |::.:|..|......|:.        .||..||..|.|..|||.:|||||||
plant    49 AEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRA-- 111

  Fly   347 RKQNKKGSDPNVMGVGVQHADYSQLLDA-------KAKLEPG-LHLSHSL 388
            |.:||:..|           :|::|.:|       |.:|:.. :||...|
plant   112 RWKNKRVED-----------EYTKLKNAYETTVVEKCRLDSEVIHLKEQL 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	23/70 (33%)
HB21	NP_179445.1	HOX	61..114	CDD:197696	20/54 (37%)