Protein Alignment cad and cdx4

DIOPT Version :9

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_571184.2
• Gene: cdx4 / 798281
• ZFINID: ZDB-GENE-980526-330
• Length: 270
• Species: Danio rerio
• Alignment Length: 340
• Identity: 121/340 - (35%)
• Similarity: 143/340 - (42%)
• Gaps: 97/340 - (28%)

  Fly    71 MFHSAAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHH---HHAHASSSSASSGSSSSGGAP 132
            |:|..|...:|     .|....|||.   |..:.....:||   ...||.|:.|       .|||
Zfish    13 MYHQGAVRRSG-----ISLPPQNFVS---TPQYSDFTGYHHVPNMETHAQSAGA-------WGAP 62

  Fly   133 -GAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAP 196
             |||:.:....|:|                     |||       .:.:|      ...|||| |
Zfish    63 YGAPREDWGAYSLG---------------------PPN-------SISAP------MSNSSPG-P 92

  Fly   197 TSASSPHHHLAHHL-SAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPA 260
            .|..||.::..|.. |||.           .|...|......|.....|.|      :.||.|..
Zfish    93 VSYCSPDYNTMHGPGSAVL-----------PPPPENIPVAQLSPERERRNS------YQWMSKTV 140

  Fly   261 YPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELA 325
            .        |||            :||||||:||||||||.||||||||:..:||||||||||||
Zfish   141 Q--------SSS------------TGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELA 185

  Fly   326 QTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAH 390
            ..|.|||||||||||||||||||..||....:....|..|:|...:.....   || .||.|..|
Zfish   186 VNLGLSERQVKIWFQNRRAKERKLIKKKLGQSDGSGGSVHSDPGSVSPLPV---PG-SLSPSDIH 246

  Fly   391 SMNPMAAMN-IPAMR 404
            .....|.|| :|:||
Zfish   247 GSLYPAQMNALPSMR 261

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeobox	295..347	CDD:278475	43/51 (84%)
cdx4	NP_571184.2	Caudal_act	15..138	CDD:282574	45/189 (24%)
		Homeobox	155..207	CDD:278475	43/51 (84%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	97	1.000	Domainoid score	I7177
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	119	1.000	Inparanoid score	I4766
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001802
OrthoInspector	1	1.000	-	-		otm25485
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24332
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2707
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	10	10.050