DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and hmx4

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001038836.2 Gene:hmx4 / 751654 ZFINID:ZDB-GENE-060825-142 Length:238 Species:Danio rerio


Alignment Length:63 Identity:27/63 - (42%)
Similarity:40/63 - (63%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQ 349
            |..||.|.|.:::..|..:||..:...||::...::.||.:|.|:|.||||||||||.|.::|
Zfish   108 KLMTKKKTRTIFSKRQIFQLESTFDMKRYLSSAERACLANSLQLTETQVKIWFQNRRNKLKRQ 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 23/54 (43%)
hmx4NP_001038836.2 Homeodomain 115..169 CDD:459649 22/53 (42%)

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