Protein Alignment cad and Isx

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_001281207.1
• Gene: Isx / 71597
• MGIID: 1918847
• Length: 242
• Species: Mus musculus
• Alignment Length: 161
• Identity: 53/161 - (32%)
• Similarity: 67/161 - (41%)
• Gaps: 39/161 - (24%)

  Fly   262 PAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQ 326
            |.|.||                 ..:.:.|.:.|..:|..|..||||.:..:.|..|..:|:||.
Mouse    66 PPQDQP-----------------QEEKKNKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLAS 113

  Fly   327 TLSLSERQVKIWFQNRRAKERKQNKKG--SDPNVMG----------VGVQHADYSQLLD-AKAKL 378
            .::|.|.:|:|||||:|||.|||.|.|  |.|...|          :|..|.....|.| |..||
Mouse   114 RINLPEARVQIWFQNQRAKWRKQEKSGNLSAPQQPGSCADTHCYDYIGTSHRMLPTLSDSAPFKL 178

  Fly   379 EPGLHLSHSLAHSMNPMAAM--NIPAMRLHP 407
            .|       ...|..|||.|  ..||...||
Mouse   179 VP-------YTDSPCPMAPMGPTAPAWPSHP 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	23/54 (43%)
Isx	NP_001281207.1	Homeodomain	79..135	CDD:459649	23/55 (42%)