Protein Alignment cad and Nkx6-3

DIOPT Version :9

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_001102925.1
• Gene: Nkx6-3 / 685102
• RGDID: 1597780
• Length: 262
• Species: Rattus norvegicus
• Alignment Length: 269
• Identity: 63/269 - (23%)
• Similarity: 96/269 - (35%)
• Gaps: 57/269 - (21%)

  Fly   166 APPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVAN-NNNNNNNNNNSPST 229
            :||.....:|.|.|.....:....:::|.:...:..||         ||. ...::......|..
  Rat    39 SPPGLGPQLAAGTPHGITDILSRPVATPNSSLLSGYPH---------VAGFGGLSSQGVYYGPQV 94

  Fly   230 HNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKY 294
            .:.:...|......|...:.... || :....|....||        .|||.:.....||.
  Rat    95 GSFSKTGNEYPTRTRNCWADTGQ-DW-RGSTRPCSNTPD--------PLSDTIHKKKHTRP---- 145

  Fly   295 RVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVM 359
              .:|..|...|||.:..::|:....::.||.:|.::|.|||:||||||.|.||  |...:|:
  Rat   146 --TFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK--KSALEPS-- 204

  Fly   360 GVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIP----------AMRLHPHLAAHSH 414
                          :.....|| ..|...|.|.|.....|.|          .:.|..|.||  .
  Rat   205 --------------SSTPRAPG-GASGDRAASENEDDEYNKPLDPDSDDEKIRLLLRKHRAA--F 252

  Fly   415 SLAAVAAHS 423
            |:.::.|||
  Rat   253 SVLSLGAHS 261

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeobox	295..347	CDD:278475	20/51 (39%)
Nkx6-3	NP_001102925.1	Homeobox	143..197	CDD:395001	22/59 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810