DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and SHOX

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_000442.1 Gene:SHOX / 6473 HGNCID:10853 Length:292 Species:Homo sapiens


Alignment Length:325 Identity:79/325 - (24%)
Similarity:118/325 - (36%) Gaps:108/325 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 GAGGGGGVGGATDGGPGSAPPNHQQHIAEGLP-SPPITVSGS---EISSPGAPTSASSPHHHLAH 208
            |.|||||.||..|.      ..:::.:..||. |..:..|.|   :|:..|    ...|.|....
Human    19 GNGGGGGGGGKKDS------ITYREVLESGLARSRELGTSDSSLQDITEGG----GHCPVHLFKD 73

  Fly   209 HLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSP 273
            |:                       :|:........|:......::..:|       :.|:.|. 
Human    74 HV-----------------------DNDKEKLKEFGTARVAEGIYECKEK-------REDVKSE- 107

  Fly   274 NLEDLSDLLDASGKTRTKD-KYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKI 337
                     |..|:|:.|. :.|..:|..|..|||:.:..:.|.....:.||:|.|.|||.:|::
Human   108 ---------DEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163

  Fly   338 WFQNRRAKERKQNKKGSDPNVMGVGVQHADYS---------------QLLDAKAKLEPGLHLSHS 387
            ||||||||.|||..:.....::|. ..|.|..               |.:.|:.:||...|    
Human   164 WFQNRRAKCRKQENQMHKGVILGT-ANHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAH---- 223

  Fly   388 LAHSMNPMAAMNIPAMRLHPHLAAH--------------------SHSLAAVAAHSHQLQQQHSA 432
             ||.            .||||||||                    |.|.|||.|.:.:...::|:
Human   224 -AHP------------HLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSS 275

  Fly   433  432
            Human   276  275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 23/54 (43%)
SHOXNP_000442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 9/20 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 7/35 (20%)
Homeodomain 118..174 CDD:459649 23/55 (42%)
SH3-binding. /evidence=ECO:0000255 242..249 0/6 (0%)
OAR 272..288 CDD:461067 1/4 (25%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 274..287 1/2 (50%)

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