DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and DRGX

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_011538391.1 Gene:DRGX / 644168 HGNCID:21536 Length:298 Species:Homo sapiens


Alignment Length:244 Identity:51/244 - (20%)
Similarity:84/244 - (34%) Gaps:89/244 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 RTKDKYRVVYTDFQRLE-LEKEYCTSRYITIRRKSELAQTLSLSERQV----------------- 335
            |.:.:.|..:| .|:|| ||..:..:.|..:..:.|||..::|:|.:|                 
Human    31 RKQRRNRTTFT-LQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQLANSCLKTELQIEIND 94

  Fly   336 ------------------KIWFQNRRAKERKQNKKGSD--------------PNVMGV-----GV 363
                              ::||||||||.||..:..||              |.|..:     |.
Human    95 TIIEHSEVEDHNFSLKGARVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPPGD 159

  Fly   364 QHADYSQLLDAKAKLE--------------PGL---------HLSHSLAHSMNPMAAMNIP---A 402
            |.....:.|:|:..|.              ||.         .|||..:....|:.:..:|   .
Human   160 QARSKKEALEAQQSLGRTVGPAGPFFPSCLPGTLLNTATYAQALSHVASLKGGPLCSCCVPDPMG 224

  Fly   403 MRLHPHLAAHSHSLAAVAA-------HSHQLQQQHSAQMSAAAAVGTLS 444
            :...|.....|:..|:||.       ||..:.|..:...|.:::.|.::
Human   225 LSFLPTYGCQSNRTASVATLRMKAREHSEAVLQSANLLPSTSSSPGPVA 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 22/90 (24%)
DRGXXP_011538391.1 Homeodomain 34..125 CDD:459649 22/91 (24%)
OAR 236..253 CDD:461067 4/16 (25%)

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