Protein Alignment cad and hoxa4a

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_571610.1
• Gene: hoxa4a / 58050
• ZFINID: ZDB-GENE-000823-4
• Length: 245
• Species: Danio rerio
• Alignment Length: 221
• Identity: 66/221 - (29%)
• Similarity: 92/221 - (41%)
• Gaps: 63/221 - (28%)

  Fly   165 SAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPST 229
            |.||..:.|....:|     ||......|..|   ..|||..|   |...:|....:.:..:.||
Zfish    16 SFPPCEEYHQNGYMP-----VSSDYYERPKDP---GFPHHEEA---SYPRSNYQEQSYDYGNVST 69

  Fly   230 HNNNNNNN-------SVSNNN---RTSPS------------------------KPPYFDWMKKPA 260
            ::.|:.::       |||.|:   .|:.|                        :|..:.||||..
Zfish    70 NDLNDFSDRHHAQPQSVSQNHGPRLTTESCVGSDGNKDCSLVSDALPGSQKSKEPVVYPWMKKVH 134

  Fly   261 YPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELA 325
            .                  :.:.||.......:.|..||..|.||||||:..:||:|.||:.|:|
Zfish   135 V------------------NTVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIA 181

  Fly   326 QTLSLSERQVKIWFQNRRAKERKQNK 351
            .|:.||||||||||||||.|.:|.:|
Zfish   182 HTMCLSERQVKIWFQNRRMKWKKDHK 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	33/54 (61%)
hoxa4a	NP_571610.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	34..99		16/70 (23%)
		Antp-type hexapeptide	126..131		1/4 (25%)
		Homeodomain	148..204	CDD:459649	33/55 (60%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	205..245		1/3 (33%)