DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and Drgx

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:223 Identity:53/223 - (23%)
Similarity:89/223 - (39%) Gaps:52/223 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 PPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSR 314
            ||....:..|.....|....|..|.:.|.:.:      .|.:.:.|..:|..|..|||..:..:.
  Fly    17 PPRLPTLDYPFAATHPYTSYSYHPAIHDETFV------RRKQRRNRTTFTLQQLEELETAFAQTH 75

  Fly   315 YITIRRKSELAQTLSLSERQVKIWFQNRRAKERK-----------------------QNKKGSDP 356
            |..:..:.:||..::|:|.:|::||||||||.||                       .:.:.|.|
  Fly    76 YPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLDKLHDSRESSP 140

  Fly   357 NVMG--------VGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPA----------- 402
            ::.|        :..:...:|.|  |..::|.....|||.:||.:|...|::.:           
  Fly   141 DITGEIDDDMDDLPPRQRSHSPL--ANGQMEQQHSHSHSHSHSRSPGGGMHLDSSDNERPLSSNQ 203

  Fly   403 MRLHPHLAAHSHSLAAVAAHSHQLQQQH 430
            :...||.|  |.||.:::|.|......|
  Fly   204 LTATPHSA--SQSLGSISAGSPSPSGMH 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 20/54 (37%)
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 20/55 (36%)
OAR 428..446 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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