DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and Dfd

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_001688962.1 Gene:Dfd / 5667644 VectorBaseID:AGAMI1_000814 Length:577 Species:Anopheles gambiae


Alignment Length:447 Identity:122/447 - (27%)
Similarity:151/447 - (33%) Gaps:168/447 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 MYYNSHHMFHSAAAASAG---EWHSPASSTADNF-----VQNVPTSAHQLMQQHH-----HHHAH 115
            |.|..||:      .|.|   |...|.|....||     |.|..|.|......||     .|||.
Mosquito     6 MGYPHHHI------QSMGINIEPKFPPSEDYANFHSGYGVGNNVTQAGTQDYLHHIQSESLHHAG 64

  Fly   116 ASSSSASSGSSSSGG---APGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEG 177
            |.|....||:..:||   ..||....|.....|.||.||||| |||..||.|             
Mosquito    65 AMSIGVPSGNGLTGGNGHVSGAGSNAEGEERGGGGGVGGGGG-GGAEGGGGG------------- 115

  Fly   178 LPSPPITVSGSEISSPGAPTSASSPHHHLAHH---------------LSAV-------------- 213
                 ::.:.::.||.........||||..||               :|.|              
Mosquito   116 -----VSAAYNDYSSSMVGHYYHHPHHHHHHHHHHHPHAHHPSHNGYMSPVQMQSTSSGLIAPAI 175

  Fly   214 ---------ANNNNNNNNNNNSPS--THNNNNNNNSVSNNNRTSPSKPPY--------------- 252
                     |.:|::.:|.|:.|:  |....|...|.|....||....|.               
Mosquito   176 TTLPPSVSTAASNSSVSNQNSFPTNITSGYYNGYYSASTEGHTSIMDTPLQCVGTEVTNTALGLQ 240

  Fly   253 -----FDWMKKPAYPAQPQ----------PDLSS---------------SP-----NLEDLSDL- 281
                 .|...:.|.|...|          .|.||               ||     |..|:.|| 
Mosquito   241 ELGMKLDRRIEEAAPTGQQLQELGMRLRCDDASSDQDEFLDEERLMLDQSPDELDSNDGDIDDLE 305

  Fly   282 ----LDASGKTRTKDKYRVV-----------------------------YTDFQRLELEKEYCTS 313
                |.......|.|..|::                             ||..|.||||||:..:
Mosquito   306 SDNDLGEDVMHATSDGERIIYPWMKKIHVAGVANGSFQPGMEPKRQRTAYTRHQILELEKEFHYN 370

  Fly   314 RYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQ 370
            ||:|.||:.|:|.||.|||||:||||||||.|.:|.||.   ||...|..::.|.|:
Mosquito   371 RYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKL---PNTKNVRKKNGDQSK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 33/83 (40%)
DfdXP_001688962.1 Homeodomain 349..405 CDD:459649 32/55 (58%)

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