Protein Alignment cad and hoxd1

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_001016678.1
• Gene: hoxd1 / 549432
• XenbaseID: XB-GENE-482731
• Length: 301
• Species: Xenopus tropicalis
• Alignment Length: 279
• Identity: 73/279 - (26%)
• Similarity: 104/279 - (37%)
• Gaps: 67/279 - (24%)

  Fly   155 VGGATDGGPGSAPPNHQ-QHIAEGL-----------PSPP----ITVSGSEISSPGAPTSASSPH 203
            |||.    |||..  || .|.:..|           |.||    ...|.::....|:........
 Frog    45 VGGV----PGSVA--HQASHQSPALYAPCSLDVAYEPPPPSDYSFLHSSTDYDYYGSNHLVEETG 103

  Fly   204 HHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVS------------NNNRTSPSKPPY---- 252
            .|:.:..|....|.:...|...|..|.........::            |....|||...|
 Frog   104 GHIPYGSSVFPGNGSYILNGQLSYRTLGEETQMAQIAQCKEPLEVYPGGNLQSISPSPGTYPKPA 168

  Fly   253 ----------FDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELE 307
                      |||||....|  |:..|.|.            .|........|..:|..|..|||
 Frog   169 SPASDTHVSTFDWMKVKRNP--PKKSLQSE------------YGVASPPCTVRTNFTTKQLTELE 219

  Fly   308 KEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLL 372
            ||:..::|:|..|:.|:|.:|.|::.||||||||||.|::|:.::||.||....|.     :..:
 Frog   220 KEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGSLPNSPPSGP-----ASSI 279

  Fly   373 DAKAKLEPGLHLSHSLAHS 391
            ..|..|...:|.:.:|:.|
 Frog   280 CVKTPLSKSVHETATLSPS 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	26/54 (48%)
hoxd1	NP_001016678.1	Antp-type hexapeptide. /evidence=ECO:0000255	178..183		3/4 (75%)
		Homeodomain	207..260	CDD:459649	26/52 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	255..301		13/49 (27%)