Protein Alignment cad and Hoxa7

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_001102703.2
• Gene: Hoxa7 / 500126
• RGDID: 1587253
• Length: 229
• Species: Rattus norvegicus
• Alignment Length: 264
• Identity: 68/264 - (25%)
• Similarity: 98/264 - (37%)
• Gaps: 95/264 - (35%)

  Fly   100 TSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGA-------PQLNETNSSIGVGGAGGGGGVGG 157
            |:...|.|     :|..:|.|.:..|..||..|||       |.|...||.:.........|:|.
  Rat    15 TAGASLFQ-----NAEPTSCSFAPNSQRSGYGPGAGAFASNVPGLYNVNSPLYQNPFASSYGLGA 74

  Fly   158 ATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNN 222
            .....|.:   ::.|:| .||.|.         .:.||...|.....|
  Rat    75 DAYNLPCA---SYDQNI-PGLCSD---------LAKGACDKADEGVLH----------------- 109

  Fly   223 NNNSPSTHNNNNNNNSVSNNNRTSPSKPPY--FDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDAS 285
                                   .|::..:  :.||:            ||.|:
  Rat   110 -----------------------GPAEASFRIYPWMR------------SSGPD----------- 128

  Fly   286 GKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQN 350
                 :.:.|..||.:|.||||||:..:||:|.||:.|:|..|.|:|||:||||||||.|.:|::
  Rat   129 -----RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 188

  Fly   351 KKGS 354
            |..|
  Rat   189 KDES 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	31/54 (57%)
Hoxa7	NP_001102703.2	Homeodomain	130..186	CDD:459649	31/55 (56%)