Protein Alignment cad and Emx2

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_001102639.1
• Gene: Emx2 / 499380
• RGDID: 1564797
• Length: 253
• Species: Rattus norvegicus
• Alignment Length: 257
• Identity: 63/257 - (24%)
• Similarity: 100/257 - (38%)
• Gaps: 51/257 - (19%)

  Fly   126 SSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEI 190
            |.:..:|..|.||..:|:.....||.|             ...|.....||.:..||
  Rat    37 SYANSSPINPFLNGFHSAAAAAAAGRG-------------VYSNPDLVFAEAVSHPP-------- 80

  Fly   191 SSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDW 255
             :|..|.....|.|.||.|               ..||:|    :.:.:..:.:..||  .::.|
  Rat    81 -NPAVPVHPVPPPHALAAH---------------PLPSSH----SPHPLFASQQRDPS--TFYPW 123

  Fly   256 M-KKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIR 319
            : .:..|.........:||....|.:.|     .|...:.|..::..|.|.||..:..:.|:...
  Rat   124 LIHRYRYLGHRFQGNDTSPESFLLHNAL-----ARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGA 183

  Fly   320 RKSELAQTLSLSERQVKIWFQNRRAKERKQ--NKKGSDPNVMGVGVQHADYSQLLDAKAKLE 379
            .:.:||.:|||:|.|||:||||||.|.::|  .::|||......|..|.:..::...:|..|
  Rat   184 ERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPE 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	22/54 (41%)
Emx2	NP_001102639.1	Homeodomain	156..212	CDD:459649	22/55 (40%)