Protein Alignment cad and abd-A

DIOPT Version :9

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 468
• Identity: 107/468 - (22%)
• Similarity: 157/468 - (33%)
• Gaps: 154/468 - (32%)

  Fly     3 SHYYNTLPYTQKHSAANLAYASA----------------------AGQPWNWTPNYHHTPP---- 41
            ||:..|.|.....:|...|.|:|                      ||...:.|.|...:|.
  Fly    22 SHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSNTIAGSNTSNTNNSSSSPSSSSN 86

  Fly    42 NHQFL----GDVDSSHAAHHAAAAHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVP--- 99
            |:..|    |.:..||.:.|...:.                     |||.||::. |.|:.|
  Fly    87 NNSNLNLSGGSLSPSHLSQHLGQSP---------------------HSPVSSSSP-FQQHHPQVQ 129

  Fly   100 ---------TSAHQLMQQHHHHHA------------HASSSSASSGSSSSGGA----------PG 133
                     ...|...|||||.::            |..|..|::..:|.|.|          .|
  Fly   130 QQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAG 194

  Fly   134 APQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTS 198
            ..|..:::.|.....:|.........|..||||..:.....|..:.:.....:.:..||...|||
  Fly   195 NSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTS 259

  Fly   199 ASSPH--HHLAHH--LSAVAN-NNNNNNNNNNSPSTHNNNNNNNSVS------------------ 240
            ...|:  :|.:.|  ||.:|. ....:.:.:....|..|:..:.||.
  Fly   260 KMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAA 324

  Fly   241 ----------------NNNRTSPSKP----------------PYFDWMKKPAYPAQPQPDLSSSP 273
                            .|..|.|:..                |.:.||....:...|
  Fly   325 SAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSP-------- 381

  Fly   274 NLEDL--SDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVK 336
             .|.:  .|....:|..|.:.  |..||.||.||||||:..:.|:|.||:.|:|..|.|:|||:|
  Fly   382 -FERVVCGDFNGPNGCPRRRG--RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIK 443

  Fly   337 IWFQNRRAKERKQ 349
            |||||||.|.:|:
  Fly   444 IWFQNRRMKLKKE 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeobox	295..347	CDD:278475	31/51 (61%)
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	31/51 (61%)
		Abdominal-A	456..478	CDD:289192	0/1 (0%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.910