Protein Alignment cad and Ubx

DIOPT Version :9

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 399
• Identity: 97/399 - (24%)
• Similarity: 148/399 - (37%)
• Gaps: 117/399 - (29%)

  Fly    11 YTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVDSSHAAHHAAAAHQMY--------YN 67
            |...|.|..:|..|..          ||             ...|..||||::.:        |.
  Fly    12 YGHPHQATGMAMGSGG----------HH-------------DQTASAAAAAYRGFPLSLGMSPYA 53

  Fly    68 SHHM--------FHSAAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSG 124
            :||:        :.::..|:..:.:...:........|:...|           .:......::|
  Fly    54 NHHLQRTTQDSPYDASITAACNKIYGDGAGAYKQDCLNIKADA-----------VNGYKDIWNTG 107

  Fly   125 SSSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAP-PNHQQHIAEGLP------SPP 182
            .|:.||..|           |.||.||.||.|||.:...|:|. .|.|.:.|.|:|      :|.
  Fly   108 GSNGGGGGG-----------GGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPD 161

  Fly   183 ITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNN---------NNNNS 238
            ..|.|...:|.|:|.|         |...:...|.:.:..|.|:....:..         |.|.:
  Fly   162 SRVGGYLDTSGGSPVS---------HRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCT 217

  Fly   239 VSN--------NNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSD--------------- 280
            :|.        ::....|...::.||   |...:...|.:.|....||:.
  Fly   218 ISGAAAQTAAASSLHQASNHTFYPWM---AIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSES 279

  Fly   281 -----LLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQ 340
                 |.|..|....:.:.|..||.:|.||||||:.|:.|:|.||:.|:|..|.|:|||:|||||
  Fly   280 LAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQ 344

  Fly   341 NRRAKERKQ 349
            |||.|.:|:
  Fly   345 NRRMKLKKE 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeobox	295..347	CDD:278475	31/51 (61%)
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	31/52 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.910