DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cad and NK7.1

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster


Alignment Length:384 Identity:84/384 - (21%)
Similarity:128/384 - (33%) Gaps:136/384 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QKHSAANLAYASAAGQPWNWTPN-YHHTPPNHQFLGDVDSSHAAHHAAAAHQMYYNSHHMFHSAA 76
            |:.|.:..|..:..|.|.||..: |...||                               |...
  Fly   159 QRRSVSTPAITTTPGPPTNWHAHVYDRLPP-------------------------------HPTP 192

  Fly    77 AASAGEWHSPASSTADNFV-----------QNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGG 130
                   ||.|.....:||           |....|.:.:::.:.......|||.:.|.:|....
  Fly   193 -------HSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSSSISMSDASEEES 250

  Fly   131 APGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGA 195
            |                      .|.|||.....:|             :...|::.:.:::|  
  Fly   251 A----------------------AVAGATSAATAAA-------------AVAATITAATVATP-- 278

  Fly   196 PTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPA 260
                      |...|:......:.::||:..|:|..:.....|.:  .:.|..||.  ...||.:
  Fly   279 ----------LDQPLNLCVVKKSRDSNNSPMPATKQSQILGKSAT--KKESSGKPA--AKKKKLS 329

  Fly   261 YPAQPQPDL------------------SSSP--------------NLEDLSDLLDASGKT--RTK 291
            ......||:                  ||||              .||...|..| ||.|  |.|
  Fly   330 STVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSD-SGSTDARRK 393

  Fly   292 DKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQN 350
            .|.|..:|..|..||||.:...:|::...::|:|:.|.::|.||||||||||.|.:||:
  Fly   394 KKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQD 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 24/54 (44%)
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 24/55 (44%)

Return to query results.
Submit another query.