DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and Antp

DIOPT Version :9

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:382 Identity:91/382 - (23%)
Similarity:139/382 - (36%) Gaps:92/382 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NYHHTPPNHQFLGDVDSSHAAHHAA-AAHQ--------------MYYNSHHMFHSAAAASAGEWH 84
            ::.|.|.|.  :.|:|:....|::. |.||              .|||...|.............
  Fly    25 HHGHYPGNG--VTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYNGQGMDQQQQHQVYSRPD 87

  Fly    85 SPASSTADNFVQ-------NVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNE--- 139
            ||:|.......|       .||....|..||...:.....:..|.......     .||:.:   
  Fly    88 SPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQ-----LPQVTQQVT 147

  Fly   140 ----------TNSSIGVGGAGGGGGVGGATDGGPGSAPP----------NHQQHIAEGLPSPPIT 184
                      ..:|..:..|  .||:|...:||   :||          |.|..:...:..|...
  Fly   148 HPQQQQQQPVVYASCKLQAA--VGGLGMVPEGG---SPPLVDQMSGHHMNAQMTLPHHMGHPQAQ 207

  Fly   185 VSGSEISSPGAPTSASSPHHHLA--HHLSAV----ANNNNNNNNNNNSPSTHNNNNNNN---SVS 240
            :..:::..|.. |.....||::.  ...|.|    |......:.....|..|..:...:   |.:
  Fly   208 LGYTDVGVPDV-TEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQN 271

  Fly   241 NNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLE 305
            .|:::|....|.:.||:                         ...||.:.:.:.|..||.:|.||
  Fly   272 PNSQSSGMPSPLYPWMR-------------------------SQFGKCQERKRGRQTYTRYQTLE 311

  Fly   306 LEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVG 362
            ||||:..:||:|.||:.|:|..|.|:|||:||||||||.|.:|:||...:|...|.|
  Fly   312 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeobox 295..347 CDD:278475 31/51 (61%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 31/175 (18%)
Homeobox 301..354 CDD:395001 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
32.910

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