DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and hhex

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_989420.1 Gene:hhex / 395060 XenbaseID:XB-GENE-487159 Length:274 Species:Xenopus tropicalis


Alignment Length:195 Identity:52/195 - (26%)
Similarity:85/195 - (43%) Gaps:43/195 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 APTSASSPHHHLAHHLSAVANNNNNNNNNN--NSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMK 257
            |||.. .|.|....::..:...::.:|...  .:|:..:.|::..|:....||...:|       
 Frog    19 APTPL-QPVHPTPFYIDDILGRSSASNGTPALPTPTLPSPNSSFTSLVATYRTPIYEP------- 75

  Fly   258 KPAYPAQPQPDLS-----------------SSPNLEDLSDLL--DASGKTRTKDKY--------- 294
            .|.:||...|..:                 |.|..|....|:  |..||......:         
 Frog    76 TPIHPAFTHPGAALAASYGASTYANPLYPFSRPVSEYTHALIRHDTLGKPLLWSPFIQRPLHKRK 140

  Fly   295 --RVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERK---QNKKGS 354
              :|.:::.|.:||||::.|.:|::...:..||:.|.|||||||.||||||||.|:   :|.:|:
 Frog   141 GGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQGN 205

  Fly   355  354
             Frog   206  205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 26/65 (40%)
hhexNP_989420.1 Homeodomain 138..196 CDD:459649 26/57 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..274 2/9 (22%)

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