Protein Alignment cad and cdx4

DIOPT Version :9

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_989417.1
• Gene: cdx4 / 395056
• XenbaseID: XB-GENE-482787
• Length: 260
• Species: Xenopus tropicalis
• Alignment Length: 278
• Identity: 96/278 - (34%)
• Similarity: 117/278 - (42%)
• Gaps: 76/278 - (27%)

  Fly   117 SSSSASSGSSSSGGAPGAPQLNET--NSSIGVGGAGGGGGVGGATDGGP-------GSAPPNHQQ 172
            |..|||:..|:...|...|..|..  :....:...|...||.|...|.|       |:.|.|...
 Frog    20 SVRSASNNHSAQNYASNQPYFNYVTYHHVPPMDEQGQPCGVWGPQYGSPREQWNSYGAGPSNTNM 84

  Fly   173 HIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNN 237
            ..:..|.......:.|..||| .|:.....|.....|.:|            ||||..:.|:
 Frog    85 AQSSDLSPNQFAYNSSGYSSP-HPSGTGILHSVDLSHTAA------------NSPSDLSQNS--- 133

  Fly   238 SVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQ 302
                           ::||.|.....                    ::||||||:||||||||.|
 Frog   134 ---------------YEWMGKTVQST--------------------STGKTRTKEKYRVVYTDHQ 163

  Fly   303 RLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKK--------------- 352
            |||||||:..|||||||||:|||.:|.|||||||||||||||||||..||
 Frog   164 RLELEKEFHYSRYITIRRKTELAASLRLSERQVKIWFQNRRAKERKLFKKKMNQFDGICSVQSDS 228

  Fly   353 -GSDPNVMGVGVQHADYS 369
             .:.||.:...|.|.|.|
 Frog   229 SSASPNPLCDSVVHTDMS 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeobox	295..347	CDD:278475	43/51 (84%)
cdx4	NP_989417.1	Caudal_act	16..139	CDD:282574	33/149 (22%)
		Homeobox	156..208	CDD:278475	43/51 (84%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	96	1.000	Domainoid score	I7188
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	113	1.000	Inparanoid score	I4705
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001802
OrthoInspector	1	1.000	-	-		otm47998
Panther	1	1.100	-	-	O	PTHR24332
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2707
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	9.090