Sequence 1: | NP_001260641.1 | Gene: | cad / 35341 | FlyBaseID: | FBgn0000251 | Length: | 445 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_989416.1 | Gene: | cdx1 / 395055 | XenbaseID: | XB-GENE-485396 | Length: | 262 | Species: | Xenopus tropicalis |
Alignment Length: | 358 | Identity: | 101/358 - (28%) |
---|---|---|---|
Similarity: | 129/358 - (36%) | Gaps: | 171/358 - (47%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 NTLPYTQKHSAANL---AYASAAGQPWNWTPNYHHTP-----PNHQFLGDVDSSHAAHHAAAAHQ 63
Fly 64 MYYNSHHMFHSAAAASAGEWH----SPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSG 124
Fly 125 SSSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSE 189
Fly 190 ISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFD 254
Fly 255 WMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIR 319
Fly 320 RKSELAQTLSLSERQVKIWFQNRRAKERKQNKK 352 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cad | NP_001260641.1 | Homeobox | 295..347 | CDD:278475 | 42/51 (82%) |
cdx1 | NP_989416.1 | Caudal_act | 13..133 | CDD:282574 | 40/261 (15%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 42..120 | 27/172 (16%) | |||
Interaction with DNA. /evidence=ECO:0000250|UniProtKB:P47902 | 152..173 | 16/20 (80%) | |||
Homeobox | 153..205 | CDD:278475 | 42/51 (82%) | ||
Interaction with 5-mCpG DNA. /evidence=ECO:0000250|UniProtKB:P47902 | 191..202 | 10/10 (100%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 203..262 | 7/8 (88%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 96 | 1.000 | Domainoid score | I7188 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 113 | 1.000 | Inparanoid score | I4705 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001802 | |
OrthoInspector | 1 | 1.000 | - | - | otm47998 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24332 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2707 |
SonicParanoid | 1 | 1.000 | - | - | X14 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.090 |