Protein Alignment cad and cdx2

DIOPT Version :9

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_989209.1
• Gene: cdx2 / 394817
• XenbaseID: XB-GENE-483306
• Length: 252
• Species: Xenopus tropicalis
• Alignment Length: 297
• Identity: 102/297 - (34%)
• Similarity: 114/297 - (38%)
• Gaps: 109/297 - (36%)

  Fly   132 PGAPQLNETNSSIGVG---GA-GGGGGVGGATDGGP-----GSAP---PNHQQHIAEGLPSP--- 181
            |.|||..:..|..|:|   || ..|...|..|..||     |..|   |.| .||.   |||
 Frog    28 PAAPQYPDYGSYHGMGLDHGAPSSGSSAGWITPYGPPRDEWGVHPTYSPGH-THIN---PSPVGN 88

  Fly   182 --------PITVSGSEI-----SSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNN 233
                    |..|.|...     :.|....|..|...|..||
 Frog    89 MAFSPDYSPAQVQGQPCVGVLPAGPPPQLSPGSEDGHRRHH------------------------ 129

  Fly   234 NNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVY 298
                               ::|::||...|                   ....||||||||||||
 Frog   130 -------------------YEWLRKPVSQA-------------------STGSKTRTKDKYRVVY 156

  Fly   299 TDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGV 363
            ||.||||||||:..|||||||||:|||..|.|||||||||||||||||||..||         .:
 Frog   157 TDQQRLELEKEFHYSRYITIRRKAELAANLGLSERQVKIWFQNRRAKERKITKK---------RI 212

  Fly   364 QHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNI 400
            |.....|........||      |:.|.|.|.|..|:
 Frog   213 QQTQTGQNGPDTLSPEP------SITHHMIPHATSNV 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeobox	295..347	CDD:278475	43/51 (84%)
cdx2	NP_989209.1	Caudal_act	13..135	CDD:368087	33/153 (22%)
		Homeobox	153..206	CDD:365835	44/52 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	96	1.000	Domainoid score	I7188
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	113	1.000	Inparanoid score	I4705
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001802
OrthoInspector	1	1.000	-	-		otm47998
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	5.050