DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and NANOGP8

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001342210.1 Gene:NANOGP8 / 388112 HGNCID:23106 Length:305 Species:Homo sapiens


Alignment Length:241 Identity:56/241 - (23%)
Similarity:89/241 - (36%) Gaps:56/241 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAP-TSASSPHHHLAHHL-SAVANNNNNNNNNNN 225
            |.|.|...:....|..|.|  .:.|.|.:.|... :||..||......| |::.....::.:::.
Human     8 PQSLPCFEESDCKESSPMP--VICGPEENYPSLQMSSAEMPHTETVSPLPSSMDLLIQDSPDSST 70

  Fly   226 SPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRT 290
            ||......:..|||:......|.|                                         
Human    71 SPKGKQPTSAENSVAKKEDKVPVK----------------------------------------- 94

  Fly   291 KDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSD 355
            |.|.|.|::..|...|...:...:|:::::..||:..|:||.:|||.||||:|.|.::..|....
Human    95 KQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKSKRWQKNNWP 159

  Fly   356 PNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIP 401
            .|..||..:         |.|...|.|:.|:.....:||..  |:|
Human   160 KNSNGVTQK---------ASAPTYPSLYSSYHQGCLVNPTG--NLP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 20/54 (37%)
NANOGP8NP_001342210.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 22/130 (17%)
Homeodomain 97..152 CDD:459649 20/54 (37%)
8 X repeats starting with a Trp in each unit 196..240
Sufficient for transactivation activity. /evidence=ECO:0000250 196..240
Sufficient for strong transactivation activity. /evidence=ECO:0000250 241..305
Blue background indicates that the domain is not in the aligned region.

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