Protein Alignment cad and nkx3-2

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: XP_073777336.1
• Gene: nkx3-2 / 337865
• ZFINID: ZDB-GENE-030127-1
• Length: 255
• Species: Danio rerio
• Alignment Length: 235
• Identity: 58/235 - (24%)
• Similarity: 98/235 - (41%)
• Gaps: 56/235 - (23%)

  Fly   183 ITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNN----------------------- 224
            |:.|..|.|.|  .|:||:.        .|:.|....:.:.|
Zfish     6 ISFSAFEDSQP--KTAASTN--------EAILNRKEESRHLNELDVCFSKSACWKIFDEMDAPER 60

  Fly   225 NSPSTHNNNNNNNSVSNNNRTS---PSKPPYFDWMKKPAYPAQPQPDLSSSPNLED-LSDLLDAS 285
            :..:.|.|.::::.:|.:|...   .:||      :|.|..|......|::..|.| :||...|.
Zfish    61 SDETEHKNYDSDSGLSEDNDAKAQIDAKP------EKDADLADETDQESAAKGLSDCVSDCNTAE 119

  Fly   286 GKT-----RTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAK 345
            .|:     :.|.:.|..::..|..|||:.:...||::...:::||.:|.|:|.||||||||||.|
Zfish   120 EKSGDAPKQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYK 184

  Fly   346 ERKQNKK----GSDPNVMGVGVQHADYSQLLDAKAKLEPG 381
            .:::...    .|.|....|.|:    ..:.|.:.:..||
Zfish   185 TKRRQMAADLLASAPAAKKVAVK----VLVRDDRRQYSPG 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	23/54 (43%)
nkx3-2	XP_073777336.1	None