DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and CG32532

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster


Alignment Length:464 Identity:111/464 - (23%)
Similarity:162/464 - (34%) Gaps:175/464 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SAAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGSS------------ 126
            |||||:|.     |::.|.:...::|         |...|:...|..:|:.|.            
  Fly   267 SAAAAAAA-----AAAAASSSSSSLP---------HVAPHSLGLSPQSSADSQQFNIFPAIFSRQ 317

  Fly   127 ---SSGGAPGAPQLNETNSSIGVGGAGG-------------GGGVGGATD---------GGPGSA 166
               |:||..|...::|...:: |||..|             .||||..|.         .|.|.:
  Fly   318 LNFSAGGQGGKLSMDELRPNL-VGGLLGLQQGLLEDHASMQHGGVGQDTKFMSFQDQRLMGIGGS 381

  Fly   167 PPNHQQHIAEGLP---SPPITVSGSEISS------------------PGAPTSA--SSPHHHLAH 208
            ..|....:|..:.   ||..|:..|..||                  .|.||..  ||.|||...
  Fly   382 HENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKCSSTPEDFSALYSGLPTPGMDSSSHHHTPA 446

  Fly   209 HLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLS--- 270
            |                   |..:..:::::|........||             :|...||   
  Fly   447 H-------------------TPPSRLSDHTISAEGAFKKLKP-------------EPNSGLSTVS 479

  Fly   271 ---SSPNLEDLSDLLDASGKTRT--------KDKYRVVYTDFQRLELEKEYCTSRYITIRRKSEL 324
               :||. ..||.|...:|.|.|        :.::|..:|..|..|||..:..|.|..|..:.||
  Fly   480 AGITSPG-SGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREEL 543

  Fly   325 AQTLSLSERQVKIWFQNRRAKERKQNKK--------------GSDPNVMGVGVQHA--------- 366
            |:|..|:|.::::||||||||.|||.|:              |...|:.|..|...         
  Fly   544 ARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNT 608

  Fly   367 --DYSQ-LLDAKAKLEPGLHLSHSLAHSMNPMAAM----------------------NIPAMRL- 405
              .|.| |....|...||:....|:|||.| |.::                      ::.|:|: 
  Fly   609 MNRYPQDLFQMGASSYPGMTQPFSMAHSTN-MGSVGVRQDSMGEFHGMSPEDEWYNKSLSALRMN 672

  Fly   406 ---HPHLAA 411
               ||:|:|
  Fly   673 SSHHPNLSA 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 23/54 (43%)
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 23/55 (42%)

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