DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and LOC3291475

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_061515274.1 Gene:LOC3291475 / 3291475 VectorBaseID:AGAMI1_000574 Length:555 Species:Anopheles gambiae


Alignment Length:449 Identity:102/449 - (22%)
Similarity:145/449 - (32%) Gaps:148/449 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVDSSHAAHHAAAAHQMYYNSHHMFHSA 75
            |...|..|:|::..|           || |.:|.      :.|..||....|    ::||....|
Mosquito   212 YPALHPGAHLSHLPA-----------HH-PAHHH------AHHLHHHGTHLH----HAHHTPPPA 254

  Fly    76 AAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNET 140
            :.|..|....|..|.      |...:.||...|..|....|...|.:..:|            ..
Mosquito   255 SHALFGGRSWPYESC------NTLNACHQQAAQQAHQRLFAQQVSPADSTS------------PV 301

  Fly   141 NSSIGVGGAGGGGGVGGATDGGPGSAPPNHQ---QHIAEGLPSPPITVSGSEISSPGAPTSASSP 202
            :|.....|:.||||:  ||..||..   :||   ..|...:.:|          ||.......|.
Mosquito   302 HSERSYLGSAGGGGL--ATLAGPAG---DHQLGGGRIGSSMRTP----------SPSDSERGDSH 351

  Fly   203 HHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQP 267
            ||||.|            ........||..|::                                
Mosquito   352 HHHLLH------------GGGGGGGDTHTENSD-------------------------------- 372

  Fly   268 DLSSSPNLEDLSDLLDAS--GKTRT--------------KDKYRVVYTDFQRLELEKEYCTSRYI 316
            |:......:|..|::|.:  |...|              |.|.||:::..|..|||:.:...||:
Mosquito   373 DVDIEEGCDDEIDMIDDTDDGSLPTTERGGHPNGLGGHKKRKRRVLFSKAQTYELERRFRQQRYL 437

  Fly   317 TIRRKSELAQTLSLSERQVKIWFQNRRAK-ERKQNKKGS------------------DPNVMGVG 362
            :...:..||..:.|:..||||||||.|.| :|..::||:                  .|..:.|.
Mosquito   438 SAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAAHEKGALDHHHGGHGGGNGTGGLPSPRRVAVP 502

  Fly   363 VQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHSHSLAAVAA 421
            |...|....|.       |....|.|..::...|.:.:|....|..|..|    ||.||
Mosquito   503 VLVRDGKPCLG-------GSKQPHDLLTAVPAAAHLQLPPGFQHASLLHH----AAAAA 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 22/55 (40%)
LOC3291475XP_061515274.1 None

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