DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and HOXB4

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_076920.1 Gene:HOXB4 / 3214 HGNCID:5115 Length:251 Species:Homo sapiens


Alignment Length:198 Identity:59/198 - (29%)
Similarity:82/198 - (41%) Gaps:62/198 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PGSAPPNHQQHIAEGLPSPP-----ITVSGSEI----SSPGAPTSASSPHHHLAHHLSAVANNNN 218
            |...||.....::...|:||     :...|...    |||..|..|.:|.|              
Human    78 PPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLH-------------- 128

  Fly   219 NNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLD 283
                  .|||               .::..:|..:.||:|....       :.:||.        
Human   129 ------PSPS---------------HSACKEPVVYPWMRKVHVS-------TVNPNY-------- 157

  Fly   284 ASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERK 348
            |.|:.:   :.|..||..|.||||||:..:||:|.||:.|:|..|.|||||:||||||||.|.:|
Human   158 AGGEPK---RSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 219

  Fly   349 QNK 351
            .:|
Human   220 DHK 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 32/54 (59%)
HOXB4NP_076920.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 17/90 (19%)
Antp-type hexapeptide 141..146 1/4 (25%)
Homeodomain 163..219 CDD:459649 32/58 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..251 1/3 (33%)

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