DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and HMX2

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_005510.1 Gene:HMX2 / 3167 HGNCID:5018 Length:273 Species:Homo sapiens


Alignment Length:290 Identity:69/290 - (23%)
Similarity:100/290 - (34%) Gaps:88/290 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 GAGGGGGVGGAT-----DGGPGSAPPNHQQHIAEGLPSPPITVS-GSEISSPG----APTSASSP 202
            |....|||...|     .|||..||..     ..|.|:...::| .||...|.    || :...|
Human    10 GCPAAGGVSSFTIQSILGGGPSEAPRE-----PVGWPARKRSLSVSSEEEEPDDGWKAP-ACFCP 68

  Fly   203 HHHLAHHLSAVANNNNNNNNNNNSPSTH----------NNNNNNNSVSNNNRTSPSKPPYFDWM- 256
            ..|               ......|..|          ...:..:......||....|.:.|:. 
Human    69 DQH---------------GPKEQGPKHHPPIPFPCLGTPKGSGGSGPGGLERTPFLSPSHSDFKE 118

  Fly   257 -KKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTR----TKDKYRVVYTDFQRLELEKEYCTSRYI 316
             |:...||.     |.||..|...|    .|..|    .|.|.|.|::..|..:||..:...||:
Human   119 EKERLLPAG-----SPSPGSERPRD----GGAERQAGAAKKKTRTVFSRSQVYQLESTFDMKRYL 174

  Fly   317 TIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPG 381
            :...::.||.:|.|:|.|||.||||||.|.::|                        ..|:|| .
Human   175 SSSERACLASSLQLTETQVKTWFQNRRNKWKRQ------------------------LSAELE-A 214

  Fly   382 LHLSHSLAHSMNPM-------AAMNIPAMR 404
            .:::|:.|.::..|       :.:.:|..|
Human   215 ANMAHASAQTLVSMPLVFRDSSLLRVPVPR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 23/54 (43%)
HMX2NP_005510.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..152 37/171 (22%)
Homeodomain 150..206 CDD:459649 23/55 (42%)

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