DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and dlx4a

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_571375.1 Gene:dlx4a / 30561 ZFINID:ZDB-GENE-980526-73 Length:250 Species:Danio rerio


Alignment Length:270 Identity:66/270 - (24%)
Similarity:104/270 - (38%) Gaps:70/270 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 NHQQHIAEGLPSPPITVSG---------SEISSPGAPTSASSP---HHHLAHHLSAVANNNNNNN 221
            :|||| :.|:......|.|         ....|||| .|.|.|   |:..|||            
Zfish    29 SHQQH-SPGVSHAHYPVHGLHQGAHSQYDAAFSPGA-ASYSRPLAYHYSTAHH------------ 79

  Fly   222 NNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASG 286
                .|..:....:|::|                    .|......|.....::|  |..:..:|
Zfish    80 ----HPGAYLPYQHNSAV--------------------GYSRVEDADSEKQSSIE--SGEIRLNG 118

  Fly   287 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNK 351
            |.:...|.|.:|:..|...|.:.:..::|:.:..:::||..|.|::.||||||||:|:|.:|..|
Zfish   119 KGKKIRKPRTIYSSLQLQALNQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKRSKYKKIMK 183

  Fly   352 KGSD-PNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHSHS 415
            .||. |.  |..:|.|..|     .|...||          |.|:..:::|:.....|...:.:|
Zfish   184 HGSSGPE--GEHLQAASAS-----GAPCSPG----------MPPLWDVSMPSKGAPIHSGGYMNS 231

  Fly   416 LAAVAAHSHQ 425
            .....:..||
Zfish   232 FGHWYSGHHQ 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 20/54 (37%)
dlx4aNP_571375.1 Homeodomain 124..180 CDD:459649 20/55 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..202 8/26 (31%)

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