Protein Alignment cad and emx2

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_571355.2
• Gene: emx2 / 30537
• ZFINID: ZDB-GENE-990415-54
• Length: 247
• Species: Danio rerio
• Alignment Length: 254
• Identity: 66/254 - (25%)
• Similarity: 97/254 - (38%)
• Gaps: 66/254 - (25%)

  Fly   116 ASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAGGGGGV-GGATDGGPGSAPPNHQQHIAEGLP 179
            |:.|.|:|...:       |.||..:|| |.|.....|.| ..|....|.||.|.|      .:|
Zfish    34 AALSYANSSQMN-------PFLNGFHSS-GRGVYSNPGLVFAEAVSHPPNSAVPVH------SVP 84

  Fly   180 SPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNR 244
             ||..::...:|      |:.|||...|              :....|||
Zfish    85 -PPHALAAHPLS------SSHSPHPLFA--------------SQQRDPST--------------- 113

  Fly   245 TSPSKPPYFDWM-KKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEK 308
                   ::.|: .:..|.........:||....|.:.|     .|...:.|..::..|.|.||.
Zfish   114 -------FYPWLIHRYRYLGHRFQGNETSPESFLLHNAL-----ARKPKRIRTAFSPSQLLRLEH 166

  Fly   309 EYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQ--NKKGSDPNVMGVGVQH 365
            .:..:.|:....:.:||.:|||:|.|||:||||||.|.::|  .::|||......|..|
Zfish   167 AFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHH 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	22/54 (41%)
emx2	NP_571355.2	Homeodomain	150..206	CDD:459649	22/55 (40%)