DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment cad and emx3

DIOPT Version :9

Sequence 1:	NP_001260641.1	Gene:	cad / 35341	FlyBaseID:	FBgn0000251	Length:	445	Species:	Drosophila melanogaster
Sequence 2:	NP_571354.1	Gene:	emx3 / 30536	ZFINID:	ZDB-GENE-990415-53	Length:	233	Species:	Danio rerio

Alignment Length:	200	Identity:	55/200 - (27%)
Similarity:	83/200 - (41%)	Gaps:	44/200 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   179 PSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNN 243
            |||    .||...:.|....:|||....                  ..||||   :.|:.:|..:
Zfish    43 PSP----FGSCFQNSGRTLYSSSPEMMF------------------TDPSTH---STNSGLSLRH 82

  Fly   244 RTSPSKP----------PYFDWMKKPAYPAQP-QPDLSSSPNLEDLSDLLDASGKTRTKDKYRVV 297
            ...|::|          .::.|:.:..|.... |.|.||..||     ||......:.| :.|..
Zfish    83 LQIPTQPFFSPHQRDTLNFYPWVLRNRYLGHRFQGDDSSPENL-----LLHGPFSRKPK-RIRTA 141

  Fly   298 YTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQ--NKKGSDPNVMG 360
            ::..|.|.||:.:..:.|:....:.:||..|.|:|.|||:||||||.|.::|  .::..||....
Zfish   142 FSPSQLLRLERAFEKNHYVVGAERKQLANGLCLTETQVKVWFQNRRTKHKRQKLEEESPDPQQKR 206

  Fly   361 VGVQH 365
            .|.||
Zfish   207 KGSQH 211

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeobox	295..347	CDD:278475	21/51 (41%)
emx3	NP_571354.1	Homeobox	139..191	CDD:278475	21/51 (41%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.900