DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and otx2a

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_073764513.1 Gene:otx2a / 30462 ZFINID:ZDB-GENE-980526-27 Length:364 Species:Danio rerio


Alignment Length:292 Identity:64/292 - (21%)
Similarity:105/292 - (35%) Gaps:95/292 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 NNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDAS-GKTRTKDKYRVVYT 299
            |.:...:.:.||.......::|:..| |.....|..:     ..|||..| |......|.|...|
Zfish    11 NITEDQDKKVSPWSSTMMSYLKQAPY-AMNGLGLGGA-----TMDLLHPSVGYPTNPRKQRRERT 69

  Fly   300 DFQRLE---LEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKK--------- 352
            .|.|.:   ||..:..:||..|..:.|:|..::|.|.:|::||:|||||.|:|.::         
Zfish    70 TFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSTNSKIRP 134

  Fly   353 ------------------------------------GSDPNVM-GVGVQHADYS----QLLDAKA 376
                                                ||:|:.: |||:..:..|    ..:.:.|
Zfish   135 AKKKPSPSRESPGSESSGHFTPPAVSSSSSSSSSSSGSNPSALSGVGLISSSSSGTPVPSIWSPA 199

  Fly   377 KLEPGLHLSHSLAHSMNPMAA-------------MNIPAMRLHPHLAAHSHS------------- 415
            .:.| :....||.....|.:|             ..:|:..: |:..|.|::             
Zfish   200 PVSP-VPAPPSLPDISPPASASCMQRAMSSGGGTTGVPSYPM-PYNQAPSYAQGYPTSNAASYFG 262

  Fly   416 -------LAAVAAHSHQLQQQHSAQMSAAAAV 440
                   ||.:..|:|.....|.:|:|.||||
Zfish   263 GMDCGSYLAPMTGHAHHHPHAHHSQLSTAAAV 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 22/57 (39%)
otx2aXP_073764513.1 None

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