DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and hoxb8b

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:111 Identity:40/111 - (36%)
Similarity:58/111 - (52%) Gaps:28/111 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 PSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYC 311
            |.....|.||:       ||                 |:|:.|.    |..|:.:|.||||||:.
Zfish   129 PCTAQLFPWMR-------PQ-----------------ATGRRRG----RQTYSRYQTLELEKEFL 165

  Fly   312 TSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPN 357
            .:.|:|.:|:.|::..|:|:||||||||||||.|.:|::.|...|:
Zfish   166 FNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEHNKDKFPS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 28/54 (52%)
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139 2/4 (50%)
Homeodomain 146..202 CDD:459649 29/59 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 3/11 (27%)

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