Protein Alignment cad and hoxd11a

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_571242.1
• Gene: hoxd11a / 30405
• ZFINID: ZDB-GENE-990415-117
• Length: 276
• Species: Danio rerio
• Alignment Length: 221
• Identity: 59/221 - (26%)
• Similarity: 94/221 - (42%)
• Gaps: 39/221 - (17%)

  Fly   170 HQQHIAEGLPSPPITVSGSEISSP------GAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPS 228
            :..:||:..|...:|.....:..|      |...|..|....:...|....|.......|::..|
Zfish    44 YSSNIAQVQPVREVTFRDYGLDHPSKWHYRGNYASYYSTEEIMHRDLLQSTNRAEMIFKNDSMYS 108

  Fly   229 THNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQP-------------DLSSSPNL----- 275
            .|...|::.|...|...:...|..||...:.|...:|.|             |.:.:|:.
Zfish   109 HHAGTNSSCSFFTNVGRNGVLPQGFDQFFETANSEKPNPEQSKQKPDTSVPGDAACNPSTDSAEQ 173

  Fly   276 --EDLSDLLDA------------SGKTRTKD-KYRVVYTDFQRLELEKEYCTSRYITIRRKSELA 325
              :|.:|.::.            ||.:.||. |.|..|:.:|..|||:|:..:.||...::.:|:
Zfish   174 TKQDPTDTVEEESSVSTCDEEKNSGSSATKSRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLS 238

  Fly   326 QTLSLSERQVKIWFQNRRAKERKQNK 351
            :.|||::|||||||||||.||:|.|:
Zfish   239 RMLSLTDRQVKIWFQNRRMKEKKLNR 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	27/54 (50%)
hoxd11a	NP_571242.1	DUF3528	23..144	CDD:432284	20/99 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	139..207		11/67 (16%)
		Homeodomain	205..261	CDD:459649	27/55 (49%)