Protein Alignment cad and hoxa11b

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_571222.1
• Gene: hoxa11b / 30382
• ZFINID: ZDB-GENE-990415-4
• Length: 283
• Species: Danio rerio
• Alignment Length: 243
• Identity: 68/243 - (27%)
• Similarity: 100/243 - (41%)
• Gaps: 64/243 - (26%)

  Fly   163 PGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHH---HLAH--------HLSAVANN 216
            |.|.|..:....:    |.|...|..|:|........||..|   :|.|        |...::|.
Zfish    39 PSSCPMTYSYSTS----SLPQVQSVREVSFRDYAIDTSSKWHSRGNLPHCYATEDMVHRECLSNP 99

  Fly   217 NNNNN--NNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAY------------------ 261
            ....:  :.|||...|:|:::.::|..:...:...|..||...:.||
Zfish   100 GTLGDMLSKNNSVLYHSNSSHTSNVYGSVGRNGVLPQAFDQFFETAYGNVENQPTEHPVDRATSK 164

  Fly   262 ---PAQ--------------------PQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQR 303
               ||:                    |:|   ||.|.||.........|||.|   |..||.:|.
Zfish   165 APPPAESGSDSCRGTDETERCEETSSPEP---SSGNNEDKFSGSSNGQKTRKK---RCPYTKYQI 223

  Fly   304 LELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNK 351
            .|||:|:..|.||...::.:|::.|:|::|||||||||||.||:|.|:
Zfish   224 RELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNR 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	27/54 (50%)
hoxa11b	NP_571222.1	DUF3528	26..151	CDD:432284	26/115 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	150..215		13/70 (19%)
		Homeodomain	212..268	CDD:459649	29/58 (50%)