DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and VENTX

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_055283.1 Gene:VENTX / 27287 HGNCID:13639 Length:258 Species:Homo sapiens


Alignment Length:178 Identity:50/178 - (28%)
Similarity:75/178 - (42%) Gaps:36/178 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 SVSNNNRTSPSK-PPYFDWMKKPAYPAQ-PQPD-----LSSSPNLEDLSDLLDASGKTRTKDKYR 295
            |:....:||.:: ||....:|:.|..:. |.|:     ||..||             |....:.|
Human    44 SLPGPGQTSGAREPPQAVSIKEAAGSSNLPAPERTMAGLSKEPN-------------TLRAPRVR 95

  Fly   296 VVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMG 360
            ..:|..|...||..:...:|::...:..||:.:.|||.|:|.||||||.|.::|.:   ||.:  
Human    96 TAFTMEQVRTLEGVFQHHQYLSPLERKRLAREMQLSEVQIKTWFQNRRMKHKRQMQ---DPQL-- 155

  Fly   361 VGVQHADYSQLLDA-------KAKLEPGLHLSHSLAHSMNPMAAMNIP 401
                |:.:|..|.|       .:.|..||.|....|....|.|.|..|
Human   156 ----HSPFSGSLHAPPAFYSTSSGLANGLQLLCPWAPLSGPQALMLPP 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 20/54 (37%)
VENTXNP_055283.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 14/61 (23%)
Homeodomain 93..148 CDD:459649 20/54 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..248
Blue background indicates that the domain is not in the aligned region.

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