DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and Tlx3

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_036012630.1 Gene:Tlx3 / 27140 MGIID:1351209 Length:338 Species:Mus musculus


Alignment Length:402 Identity:78/402 - (19%)
Similarity:127/402 - (31%) Gaps:176/402 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 APGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGA 195
            |||||....                    :|.|.::||:         |:.|......|     |
Mouse    20 APGAPWPRR--------------------NGDPAASPPS---------PAQPFRPPRME-----A 50

  Fly   196 PTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKP- 259
            |.||.:||.|                    .|.:...:...||...::..:|..|....::..| 
Mouse    51 PASAQTPHPH--------------------EPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPP 95

  Fly   260 ------AYPAQPQ-----------------------------------------------PDLSS 271
                  |||:.|.                                               |.:.|
Mouse    96 GGRPGAAYPSLPASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPS 160

  Fly   272 SPNLEDLSDL----LDASGK--------------------------TRTKDKYRVVYTDFQRL-- 304
            .|.:..|..|    :::|.:                          .||..|.:...|.|.|:  
Mouse   161 VPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQI 225

  Fly   305 -ELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADY 368
             ||||.:...:|:....::.||::|.:::.|||.||||||.|.|:|..:..:       .:....
Mouse   226 CELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEERE-------AERQQA 283

  Fly   369 SQLLDAKAKLEPGLHLSH-----SLAHSMNPMAAMNIPAMRLHPHLAAHSHSLAAVAAHSHQLQQ 428
            |:|:         |.|.|     ||..|:.|            ..|..|:.||.|:  .:.|..:
Mouse   284 SRLM---------LQLQHDAFQKSLNDSIQP------------DPLCLHNSSLFAL--QNLQPWE 325

  Fly   429 QHSAQMSAAAAV 440
            :.|:::.|..::
Mouse   326 EDSSKVPAVTSL 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 22/57 (39%)
Tlx3XP_036012630.1 PRK07764 <20..>109 CDD:236090 29/142 (20%)
Homeodomain 214..270 CDD:459649 21/55 (38%)

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