DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cad and ceh-9

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001021797.1 Gene:ceh-9 / 267057 WormBaseID:WBGene00000434 Length:147 Species:Caenorhabditis elegans


Alignment Length:135 Identity:40/135 - (29%)
Similarity:64/135 - (47%) Gaps:34/135 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 PYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASG------------------------KTRTK 291
            |||..:     .:..:|...:|..::|:.||...:|                        ||:.|
 Worm    12 PYFALL-----TSDVKPQRRTSHLIKDILDLPTVNGEIDEFGRCKSSLDQAKESPIEKCQKTKRK 71

  Fly   292 DKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAK----ERKQNKK 352
             |.|..::..|..||||::...:|::...:||||:.|.::|.||||||||||.|    |.::.:.
 Worm    72 -KARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIESEKERS 135

  Fly   353 GSDPN 357
            |..|:
 Worm   136 GEIPD 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 26/58 (45%)
ceh-9NP_001021797.1 Homeodomain 71..127 CDD:459649 26/56 (46%)

Return to query results.
Submit another query.