DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and GBX2

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001476.2 Gene:GBX2 / 2637 HGNCID:4186 Length:348 Species:Homo sapiens


Alignment Length:351 Identity:88/351 - (25%)
Similarity:131/351 - (37%) Gaps:90/351 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 VPTSAHQ-LMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDG 161
            :|.:|.| .:...|.||...|..:....|.:.|.|     |..|..               ||..
Human    65 LPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMA-----LTSTLM---------------ATLP 109

  Fly   162 GPGSAPPNHQQHIAEGLPSP-PITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNN 225
            |..||.|.||:..|....:| |:...|:...:......|......||...|.:|.:.......:.
Human   110 GGFSASPQHQEAAAARKFAPQPLPGGGNFDKAEALQADAEDGKGFLAKEGSLLAFSAAETVQASL 174

  Fly   226 SPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNL--------EDLSDLL 282
            ..:......:.:.|.::.:.           |:.::..:...|.||..||        ||....|
Human   175 VGAVRGQGKDESKVEDDPKG-----------KEESFSLESDVDYSSDDNLTGQAAHKEEDPGHAL 228

  Fly   283 D-------ASGKTRTKDK---YRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKI 337
            :       |:|.|.:..|   .|..:|..|.||||||:...:|:::..:|::|..|.|||.||||
Human   229 EETPPSSGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 293

  Fly   338 WFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPA 402
            |||||||| .|:.|.|:..:..|                  ||          |.||...:.||.
Human   294 WFQNRRAK-WKRVKAGNANSKTG------------------EP----------SRNPKIVVPIPV 329

  Fly   403 MRLHPHLAAHSHSLAAVAAHSHQLQQ 428
                 |:     |..|:.:...||:|
Human   330 -----HV-----SRFAIRSQHQQLEQ 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 29/57 (51%)
GBX2NP_001476.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 4/15 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 9/27 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 14/82 (17%)
Homeodomain 248..304 CDD:459649 28/56 (50%)

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