DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cad and Obox7

DIOPT Version :9

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001033765.1 Gene:Obox7 / 194588 MGIID:3646231 Length:218 Species:Mus musculus


Alignment Length:181 Identity:42/181 - (23%)
Similarity:70/181 - (38%) Gaps:56/181 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 QHIAEGLPSPPITVSGSEISSPGA--PTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNN 234
            |.:|:.|   |..:|.|.:.:||:  .:|.|.|..:|.             ...:..||      
Mouse    27 QELAKNL---PFQMSQSPLVTPGSTMQSSLSVPERNLL-------------QQESEGPS------ 69

  Fly   235 NNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYT 299
                     |.|...|....::.|       |..|.:|.|..                |.|:||:
Mouse    70 ---------RQSGCMPLSDKYVNK-------QTGLLASRNFR----------------KERIVYS 102

  Fly   300 DFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQN 350
            ..|:..|:|.:...:|...::..|||..:.:::.::|.||:|.|||.|:.|
Mouse   103 KEQQRLLQKHFDECQYPKEKKIVELAVLIGVTKMEIKKWFKNNRAKYRQMN 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeobox 295..347 CDD:278475 17/51 (33%)
Obox7NP_001033765.1 homeodomain 95..153 CDD:238039 19/73 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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