Protein Alignment cad and pha-2

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_508131.4
• Gene: pha-2 / 187454
• WormBaseID: WBGene00004011
• Length: 214
• Species: Caenorhabditis elegans
• Alignment Length: 182
• Identity: 53/182 - (29%)
• Similarity: 78/182 - (42%)
• Gaps: 40/182 - (21%)

  Fly   205 HLAHHLSAVANNNNNNNNNNNSPSTHN-----NNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQ 264
            |::..|:|..:.|..|.     |...|     |.|.|.::.|      ...|...|:
 Worm    68 HVSQQLAAQLSQNGKNR-----PGAPNQVPLLNMNVNQTMGN------MWDPRLSWL-------- 113

  Fly   265 PQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLS 329
             .|.:|.||...       ..|:.|        :|:.|...||.::.:.:|::.:.:.:||::||
 Worm   114 -YPYMSKSPQKR-------KGGQIR--------FTNEQTDALEHKFDSHKYLSPQERKKLAKSLS 162

  Fly   330 LSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPG 381
            |||||||.||||||||.|:..|.|.|.:.|..|.......||..:...|..|
 Worm   163 LSERQVKTWFQNRRAKWRRVRKDGEDEDEMPNGASARSLGQLQSSNPFLSHG 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	24/54 (44%)
pha-2	NP_508131.4	Homeodomain	130..181	CDD:459649	25/58 (43%)