Protein Alignment cad and vab-15

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_509648.1
• Gene: vab-15 / 181197
• WormBaseID: WBGene00006881
• Length: 225
• Species: Caenorhabditis elegans
• Alignment Length: 249
• Identity: 48/249 - (19%)
• Similarity: 85/249 - (34%)
• Gaps: 115/249 - (46%)

  Fly   171 QQHIAEGLPSP-PITVS---------------GSE-----------------ISSPGAPTSASSP 202
            :|...|.||.| |||..               |::                 :||..:|.|.:|.
 Worm    24 KQKCREDLPKPTPITPKTPMLIPGLHPMTPYFGAQLDPVMIYFAQTGNRLPIVSSDSSPESCASS 88

  Fly   203 HHHLAHHLSAVANNNNNNNNNNNSP----------STHNNNNNNNSVSNNNRTSPSKPPYFDWMK 257
            ...:.|.|..:::...::..::::.          ..|.||                       :
 Worm    89 PLSMQHSLQWLSSQREDSPTSDDAKIQIGLSKCMLRKHKNN-----------------------R 130

  Fly   258 KPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKS 322
            ||..|...|                                   |.:.||:::.:.:|::|..::
 Worm   131 KPRTPFSTQ-----------------------------------QLISLERKFQSKQYLSIAERA 160

  Fly   323 ELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKA 376
            |.:.:|.|:|.||||||||||||.::              :|.|:..::..|:|
 Worm   161 EFSASLQLTETQVKIWFQNRRAKSKR--------------LQEAEVEKVKFAQA 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	21/54 (39%)
vab-15	NP_509648.1	Homeodomain	130..186	CDD:459649	25/90 (28%)