Protein Alignment cad and mab-5

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_498695.1
• Gene: mab-5 / 176091
• WormBaseID: WBGene00003102
• Length: 200
• Species: Caenorhabditis elegans
• Alignment Length: 189
• Identity: 58/189 - (30%)
• Similarity: 85/189 - (44%)
• Gaps: 51/189 - (26%)

  Fly   184 TVSGSEISSPGAPTSASSPHHHLAHHLSAVANN------------NNNNN-------NNNNSPST 229
            |.:.|:.:|.|...||||     :...:|.|||            ||..:       :|:::|..
 Worm    19 TTASSQSASSGTSASASS-----SAAAAAAANNLKTYELYNHTYMNNMKHMLAAGWMDNSSNPFA 78

  Fly   230 HNNNNNNNSVSNNNRTS-PS-KPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKD 292
            :|.....::.....||| |: ..|.|.|||.                         ...|.....
 Worm    79 YNPLQATSANFGETRTSMPAISQPVFPWMKM-------------------------GGAKGGESK 118

  Fly   293 KYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNK 351
            :.|..|:..|.||||||:...:|:|.:|:.|:::||.|:||||||||||||.|.:|:.|
 Worm   119 RTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAK 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	29/54 (54%)
mab-5	NP_498695.1	Homeodomain	118..174	CDD:459649	29/55 (53%)