DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and Meox1

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_036012267.1 Gene:Meox1 / 17285 MGIID:103220 Length:271 Species:Mus musculus


Alignment Length:206 Identity:42/206 - (20%)
Similarity:62/206 - (30%) Gaps:66/206 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PYTQKHSAANLAYASAAGQPWNWTPNYHHTPPN----HQ--------FLGDVDSS--HAAHHAAA 60
            |:::..||:.|:                |.||.    ||        ...|..:|  .|..|:..
Mouse    25 PHSEDSSASGLS----------------HYPPTPFSFHQKSDFPATAAYPDFSASCLAATPHSLP 73

  Fly    61 AHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGS 125
            ..:..:|..|    .|.....:||.|.|......                        :...:||
Mouse    74 RTERIFNEQH----PAFPQTPDWHFPISEAGQRL------------------------NLGPAGS 110

  Fly   126 SSSGGAPGAPQLNETNSSIGVGGAGGGGGVGG--ATDGGPGSAPPNHQQHIAEGLPSPPITVSGS 188
            :...|| |:|.|.:     |..|.|....|.|  |.:....|:....::.....:|.|...|...
Mouse   111 AREMGA-GSPGLVD-----GTAGLGEDCMVLGTIANETEKKSSRRKKERSGQSLVPEPEDEVETC 169

  Fly   189 EISSPGAPTSA 199
            |..|...||.|
Mouse   170 EGGSACVPTGA 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649
Meox1XP_036012267.1 None
Blue background indicates that the domain is not in the aligned region.

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