Protein Alignment cad and Hoxc5

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_783857.1
• Gene: Hoxc5 / 15424
• MGIID: 96196
• Length: 222
• Species: Mus musculus
• Alignment Length: 192
• Identity: 55/192 - (28%)
• Similarity: 86/192 - (44%)
• Gaps: 41/192 - (21%)

  Fly   179 PSPPITVSGSEISS-----PGAP--TSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNN 236
            |:|..::.|.::::     |..|  ::|::|.|.|... .|...|....:.....|:......::
Mouse    52 PAPSNSLHGVDMAANPRAHPDRPACSAAAAPGHALGRD-EAAPLNPGMYSQKAARPALEERAKSS 115

  Fly   237 NSVSNNNRTS---------PSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKD 292
            ..:......:         |:.|..:.||.|                       |..|.:|..|
Mouse   116 GEIKEEQAQTGQPAGLSQPPAPPQIYPWMTK-----------------------LHMSHETDGK- 156

  Fly   293 KYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGS 354
            :.|..||.:|.||||||:..:||:|.||:.|:|..|.|:|||:||||||||.|.:|.:|..|
Mouse   157 RSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKS 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	31/54 (57%)
Hoxc5	NP_783857.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	68..141		11/73 (15%)
		Antp-type hexapeptide	140..145		1/4 (25%)
		Homeodomain	156..212	CDD:459649	32/56 (57%)