DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and Hoxb8

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_034591.1 Gene:Hoxb8 / 15416 MGIID:96189 Length:243 Species:Mus musculus


Alignment Length:118 Identity:42/118 - (35%)
Similarity:60/118 - (50%) Gaps:27/118 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 SNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRL 304
            :..:..|||....|.||:..|                       |:|:.|.    |..|:.:|.|
Mouse   122 AEGSEQSPSPTQLFPWMRPQA-----------------------AAGRRRG----RQTYSRYQTL 159

  Fly   305 ELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPN 357
            |||||:..:.|:|.:|:.|::..|.|:||||||||||||.|.:|:|.|...|:
Mouse   160 ELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 28/54 (52%)
Hoxb8NP_034591.1 Antp-type hexapeptide 134..139 2/4 (50%)
Homeodomain 147..203 CDD:459649 29/59 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..243 4/10 (40%)

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