Protein Alignment cad and gbx1

DIOPT Version :10

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_777286.1
• Gene: gbx1 / 142985
• ZFINID: ZDB-GENE-020117-2
• Length: 316
• Species: Danio rerio
• Alignment Length: 293
• Identity: 69/293 - (23%)
• Similarity: 111/293 - (37%)
• Gaps: 60/293 - (20%)

  Fly   122 SSGSSSSGGAPGAPQLNETNSSIGVGGAGGGGGVG---GATDGGPGSAPPNHQQHIAEGLPSPPI 183
            |..|..||..|.||..:..........||.|.|:.   ..|...|..:.|....:..:.:|.|.:
Zfish    48 SHSSLPSGIPPLAPLASFAGRLTNTFCAGLGQGMPSMVALTTTLPSFSDPPDSFYPPQEMPGPRL 112

  Fly   184 TVSGSEISSPGAPTSASSPHHHL--------AHHLSAVANNNNNNNNNN------------NSPS 228
            ...|:.::      ...|||..|        .....|||......::::            :...
Zfish   113 GADGTGMN------RQESPHDELKGSELLNFTETFQAVAGETKLYSSDDEKLDLKAAEAACSDRE 171

  Fly   229 THNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLS-DLLDASGKTRTKD 292
            ..:.::.|.|.|:.|..:.:                     |....|:..| |.|...|......
Zfish   172 DSSADSENESFSDGNTCASA---------------------SQKGKLKGGSQDALPPGGSAGKSR 215

  Fly   293 KYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERK------QNK 351
            :.|..:|..|.||||||:...:|:::..:|::|..|.|||.||||||||||||.::      .|:
Zfish   216 RRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAGNVNNR 280

  Fly   352 KGS---DPNVMGVGVQHADYSQLLDAKAKLEPG 381
            .|.   :|.::.....|.:...:.....::|||
Zfish   281 SGEPVRNPKIVVPIPVHVNRFAVRSQHQQIEPG 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	28/54 (52%)
gbx1	NP_777286.1	Homeodomain	215..271	CDD:459649	28/55 (51%)