DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and NKX2-6

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001129743.2 Gene:NKX2-6 / 137814 HGNCID:32940 Length:301 Species:Homo sapiens


Alignment Length:313 Identity:68/313 - (21%)
Similarity:97/313 - (30%) Gaps:108/313 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSG----GAPGAPQLNETNSSIG 145
            ||.:||        |.|...:::........|:|.......|...    .....|:.:|      
Human     4 SPVTST--------PFSVKDILRLERERSCPAASPHPRVRKSPENFQYLRMDAEPRGSE------ 54

  Fly   146 VGGAGGGGG----VGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHL 206
            |..||||||    .|....|||..|               .:.:....:..|....:|:||    
Human    55 VHNAGGGGGDRKLDGSEPPGGPCEA---------------VLEMDAERMGEPQPGLNAASP---- 100

  Fly   207 AHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSS 271
                         .......|. ....|:.:||.......|                        
Human   101 -------------LGGGTRVPE-RGVGNSGDSVRGGRSEQP------------------------ 127

  Fly   272 SPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVK 336
                           |.|.:.|.||:::..|.|.||:.:...||::...:..||..|.|:..|||
Human   128 ---------------KARQRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVK 177

  Fly   337 IWFQNRRAKERKQNKKGS--------DPNVMGVGVQHADYSQLLDAKAKLEPG 381
            |||||||.|.::|.:..|        .|..:.|.|      .:.|.|..|.||
Human   178 IWFQNRRYKCKRQRQDKSLELAGHPLTPRRVAVPV------LVRDGKPCLGPG 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 24/54 (44%)
NKX2-6NP_001129743.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..135 28/190 (15%)
Homeodomain 133..189 CDD:459649 24/55 (44%)

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