DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and C15

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_061502731.1 Gene:C15 / 1274348 VectorBaseID:AGAMI1_008972 Length:326 Species:Anopheles gambiae


Alignment Length:295 Identity:63/295 - (21%)
Similarity:111/295 - (37%) Gaps:89/295 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 NHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHN-- 231
            :||.|..|                   ||: .||:.:|...:|.:...:.:.:..:....:.:  
Mosquito    68 DHQTHSTE-------------------PTT-RSPNENLPFSISRLLGKSYDRDQKDKDAGSEDTG 112

  Fly   232 -----NNNNNNSVSNNN---------------------RTSPSKPPY--FDWMKKPAYPA----Q 264
                 .|.::.:||:.:                     |..|.:.|.  ..|...|.:||    |
Mosquito   113 PEGLIKNGHHITVSSPSSLQYAAGALYSYPMYPGGHVLRVPPQRGPCNPLSWTLPPLHPAALAHQ 177

  Fly   265 PQPD-LSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRL---ELEKEYCTSRYITIRRKSELA 325
            ...| |::.|    ::..:....:.||..|.:...|.|.|:   ||||.:...:|:....::.||
Mosquito   178 AVKDRLAAFP----IARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALA 238

  Fly   326 QTLSLSERQVKIWFQNRRAKERKQNKKGSD-----PNVMGVGVQHADYSQ-------LLDAKAKL 378
            :.|.:::.|||.||||||.|.|:|..:..:     .|.:.:.:|....|:       ...|.:..
Mosquito   239 RGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEALSKGFGQPPPSAAAPSAT 303

  Fly   379 EPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHS 413
            .||.           |:||::    .|.|...||:
Mosquito   304 TPGA-----------PLAALH----GLQPWAEAHT 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 22/57 (39%)
C15XP_061502731.1 None

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